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Pearson Principles of Biochemistry 5th Edition

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Principles of Biochemistry 5th Edition Pearson PDF

Principles Of Biochemistry 5Th Edition Pearson Pdf

By Laurence Moran , Robert Horton , Gray Scrimgeour, Marc Perry

Table of Contents

Principles of Biochemistry 5th Edition Contents

PART 1: INTRODUCTION
1. Introduction to Biochemistry
2. Water

PART 2: STRUCTURE AND FUNCTION
3. Amino Acids and the Primary Structures of Proteins
4. Proteins: Three-Dimensional Structure and Function
5. Properties of Enzymes
6. Mechanisms of Enzymes
7. Coenzymes and Vitamins
8. Carbohydrates
9. Lipids and Membranes

PART 3: METABOLISM AND BIOENERGETICS
10. Introduction to Metabolism
11. Glycolysis
12. Gluconeogenesis, The Pentose Phosphate Pathway, and Glycogen Metabolism
13. The Citric Acid Cycle
14. Electron Transport and ATP Synthesis
15. Photosynthesis
16. Lipid Metabolism
17. Amino Acid Metabolism
18. Nucleotide Metabolism

PART 4: BIOLOGICAL INFORMATION FLOW
19. Nucleic Acids
20. DNA Replication, Repair, and Recombination
21. Transcription and RNA Processing
22. Protein Synthesis

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Principles of Medical Biochemistry 3rd Edition

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Principles of Medical Biochemistry 3rd Edition PDF

Principles Of Medical Biochemistry 3Rd Edition Pdf

By Gerhard Meisenberg PhD , William H. Simmons PhD

Principles of Medical Biochemistry 3rd Edition PDF. “Highly Commended,” Basic and Clinical Sciences Category, British Medical Association 2012 Medical Book Competition

  • Access the fully searchable text online at www.studentconsult.com, along with downloadable illustrations, 150 USMLE-style test questions, 20 clinical case studies, chapter summaries, and integration links to related subjects.
  • Understand biochemistry, cell biology, and genetics together in context through an integrated approach.
  • Get only the information you need for your course with comprehensive yet focused coverage of relevant topics.
  • Review and reinforce your learning using the glossary of technical terms, highlighted in the text and with interactive features online.
  • Tap into the most up-to-date coverage of new developments in genome research, the molecular basis of genetic diseases, techniques of DNA sequencing and molecular diagnosis, RNA interference as a mechanism both for regulation of gene expression and for anti-viral defense, and more.
  • Gain a clear visual understanding through new and updated figures that provide current and relevant guidance.
  • Make the link between basic science and clinical medicine with new Clinical Example boxes in nearly every chapter.

Principles of Medical Biochemistry 3rd Edition Focuses on the most essential biochemistry principles and how they apply to clinical medicine

Table of Contents

Principles of Medical Biochemistry 3rd Edition Table of Contents

  1. Introduction to biomolecules
  2. Introduction to protein structure
  3. Oxygen-binding proteins : hemoglobin and myoglobin
  4. Enzymatic reactions
  5. Coenzymes
  6. DNA, RNA, and protein synthesis
  7. The human genome
  8. Protein targeting and proteostasis
  9. Introduction to genetic diseases
  10. Viruses
  11. DNA technology
  12. Biological membranes
  13. The cytoskeleton
  14. The extracellular matrix
  15. Extracellular messengers
  16. Intracellular messengers
  17. Plasma proteins
  18. Defense mechanisms
  19. Cellular growth control and cancer
  20. Digestive enzymes
  21. Introduction to metabolic pathways
  22. Glycolysis, tricarboxylic acid cycle, and oxidative phosphorylation
  23. Oxygen deficiency and oxygen toxicity
  24. Carbohydrate metabolism
  25. The metabolism of fatty acids and triglycerides
  26. The metabolism of membrane lipids
  27. Lipid transport
  28. Amino acid metabolism
  29. Metabolism of iron and heme
  30. The metabolism of purines and pyrimidines
  31. Micronutrients
  32. Integration of metabolism

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Principles of Organic Chemistry Robert J. Ouellette

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Principles of Organic Chemistry Robert J. Ouellette

Principles Of Organic Chemistry Robert J. Ouellette

By Robert J. Ouellette , J. David Rawn

Principles of Organic Chemistry Robert J. Ouellette PDF. Class-tested and thoughtfully designed for student engagement, Principles of Organic Chemistry PDF provides the tools and foundations needed by students in a short course or one-semester class on the subject. This book does not dilute the material or rely on rote memorization. Rather, it focuses on the underlying principles in order to make accessible the science that underpins so much of our day-to-day lives, as well as present further study and practice in medical and scientific fields. This book provides context and structure for learning the fundamental principles of organic chemistry, enabling the reader to proceed from simple to complex examples in a systematic and logical way.

Utilizing clear and consistently colored figures, PPrinciples of Organic Chemistry Robert J. Ouellette begins by exploring the step-by-step processes (or mechanisms) by which reactions occur to create molecular structures. It then describes some of the many ways these reactions make new compounds, examined by functional groups and corresponding common reaction mechanisms. Throughout, this book includes biochemical and pharmaceutical examples with varying degrees of difficulty, with worked answers and without, as well as advanced topics in later chapters for optional coverage.

  • Incorporates valuable and engaging applications of the content to biological and industrial uses
  • Includes a wealth of useful figures and problems to support reader comprehension and study
  • Provides a high quality chapter on stereochemistry as well as advanced topics such as synthetic polymers and spectroscopy for class customization
Table of Contents

Principles of Organic Chemistry Robert J. Ouellette Contents

1 – Structure of Organic Compounds

2 – Properties of Organic Compounds

3 – Alkanes and Cycloalkanes

4 – Alkenes and Alkynes

5 – Aromatic Compounds

6 – Stereochemistry

7 – Nucleophilic Substitution and Elimination Reactions

8 – Alcohols and Phenols

9 – Ethers and Epoxides

10 – Aldehydes and Ketones

11 – Carboxylic Acids and Esters

12 – Amines and Amides

13 – Carbohydrates

14 – Amino Acids, Peptides, and Proteins

15 – Synthetic Polymers

16 – Spectroscopy

Solutions to In-Chapter Problems

Index

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Protein Phosphatase Protocols

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Protein Phosphatase Protocols

Protein Phosphatase Protocols

By Greg Moorhead

 

Table of Contents

Protein Phosphatase Protocols Contents

Chapter 1: Analysis of Protein Phosphatases: Toolbox For Unraveling Cell Signaling Networks

Chapter 2: A Brief Introduction to the Protein Phosphatase Families

Chapter 3: Small-Molecule Inhibitors of Ser/Thr Protein Phosphatases: Specificity, Use, and Common Forms of Abuse

Chapter 4: Synthesis and Use of the Protein Phosphatase Affinity Matrices Microcystin–Sepharose and Microcystin–Biotin–Sepharose

Chapter 5: Utilizing Protein Phosphatase Inhibitors to Define PP2A as a Regulator of Ataxia-Telangiectasia Mutated (ATM)

Chapter 6: An Automated Fluorescence-Based Method for Continuous Assay of PP2A Activity

Chapter 7: An In Vivo Assay to Quantify Stable Protein Phosphatase 2A (PP2A) Heterotrimeric Species

Chapter 8: Mutagenesis and Expression of the Scaffolding Aα and Aβ Subunits of PP2A: Assays for Measuring Defects in Binding of Cancer-Related Aα and Aβ Mutants to the Regulatory B and Catalytic C Subunits

Chapter 9: Isolation and Characterization of PP2A Holoenzymes Containing FLAG-Tagged B Subunits

Chapter 10: Purification of PP2A Holoenzymes by Sequential Immunoprecipitation with Anti-Peptide Antibodies

Chapter 11: Purification of PP2Ac from Bovine Heart

Chapter 12: Visualization of Intracellular PP1 Targeting Through Transiently and Stably Expressed Fluorescent Protein Fusions

Chapter 13: Yeast Two-Hybrid Screens To Identify Drosophila PP1-Binding Proteins

Chapter 14: Identification of Cellular Protein Phosphatase-1 Regulators

Chapter 15: Assay for Three-Way Interaction of Protein Phosphatase-1 (Glc7) with Regulatory Subunits Plus Phosphatase Inhibitor-2

Chapter 16: Phosphorylation of the Protein Phosphatase Type 1 Inhibitor Protein CPI-17 by Protein Kinase C

Chapter 17: Purification of Smooth Muscle Myosin Phosphatase Using a Thiophosphorylated Myosin Light-Chain-Affinity Resin

Chapter 18: Proteins Interacting with Saccharomyces cerevisiae Type 1 Protein Phosphatase Catalytic Subunit Identified by Single-Step Affinity Purification and Mass Spectrometry

Chapter 19: Expression of Protein Histidine Phosphatase in Escherichia coli, Purification, and Determination of Enzyme Activity

Chapter 20: The Use of RNA Interference to Analyze Protein Phosphatase Function In Mammalian Cells

Chapter 21: Recognition of a PP2C Interaction Motif in Several Plant Protein Kinases

Chapter 22: Use of Yeast Genetic Tools to Define Biological Roles of Novel Protein Phosphatases

Chapter 23: Targeting of PP2C in Budding Yeast

Chapter 24: Phosphatase Targets in TOR Signaling

Chapter 25: Functional Characterization of the Small CTD Phosphatases

Chapter 26: Genome-Scale Discovery and Characterization of Class-Specific Protein Sequences: An Example Using the Protein Phosphatases of Arabidopsis thaliana

Chapter 27: Yeast Substrate-Trapping System for Isolating Substrates of Protein Tyrosine Phosphatases

Index

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Protein Stability and Folding Theory and Practice

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Protein Stability and Folding Theory and Practice

Protein Stability And Folding Theory And Practice

By Bret A. Shirley

Protein Stability and Folding Theory and Practice PDF. The intent of this work is to bring together in a single volume the techniques that are most widely used in the study of protein stability and protein folding. Over the last decade our understanding of how p- teins fold and what makes the folded conformation stable has advanced rapidly. The development of recombinant DNA techniques has made possible the production of large quantities of virtually any protein, as well as the production of proteins with altered amino acid sequences. Improvements in instrumentation, and the development and refinement of new techniques for studying these recombinant proteins, have been central to the progress made in this field. To give the reader adequate background information about the subject, the first two chapters of this book review two different, yet related, aspects of protein stability. The first chapter presents a review of our current understanding of the forces involved in determining the conf- mational stability of proteins as well as their three-dimensional folds. The second chapter deals with the chemical stability of proteins and the pathways by which their covalent structure can degrade. The remainder of the book is devoted to techniques used in the study of these two major areas of protein stability, as well as several areas of active research. Although some techniques, such as X-ray crystallography and mass spectroscopy, are used in the study of protein stability, they are beyond the scope of this book and will not be covered extensively.

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Protein Structure, Stability, and Interactions

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Protein Structure Stability And Interactions

By John W. Shriver

Protein Structure, Stability, and Interactions PDF. In the areas of biochemistry and cell biology, characterizations of stability and molecular interactions call for a quantitative approach with a level of precision that matches the fine tuning of these interactions in a living cell. Supporting and up-dating previous Methods in Molecular Biology™ volumes, Protein Structure, Stability, and Interactions approaches its subject with a focus on theory and practical applications for both established methods as well as exciting new procedures. The volume presents an overview of many techniques currently used to study protein stability and interactions, including scanning and titration calorimetry, spectroscopic methods, high field NMR, and analytical ultracentrifugation. As a volume of the highly successful Methods in Molecular Biology™ series, this work provides the kind of detailed description and implementation advice that is crucial for getting optimal results.

Cutting-edge and easy to reference, Protein Structure, Stability, and Interactions is an ideal guide for all scientists interested in biomolecular interactions.

Table of Contents

Protein Structure, Stability, and Interactions Table of Contents

  1. Clinical signs of disease
  2. Signs of disease requiring immediate attention by a veterinary professional
  3. Observation, physical examination and diagnostic tests
  4. General stabilization of sick birds
  5. Heat
  6. Fluid therapy
  7. Nutritional support
  8. Oxygen
  9. Analgesia and anesthesia
  10. Quick guide for stabilizing birds in case of severe dyspnea, debilitation and shock
  11. Leg band constriction
  12. Bleeding pin feather
  13. Hyperthermia
  14. Bleeding nail or beak tip
  15. Perforating (bite) trauma of the beak
  16. Lacerations and cuts
  17. Bite wound or deep wound caused by claws
  18. Self-mutilation
  19. Burn injuries
  20. Contact with rodent or insect glue
  21. Oiled birds
  22. Intoxications
  23. Concussion
  24. Cloacal prolapse
  25. Vomiting
  26. Crop stasis
  27. Seizures
  28. Egg binding / Dystocia
  29. Dyspnea
  30. Falling, abnormal stances and abnormal movements
  31. Paralysis
  32. Abnormal eye or closed eyelids (inability or unwillingness to open the eye)
  33. Abnormal position of limbs. Fractures and luxations
  34. Maxillary hyperextension/palatine bone luxation
  35. Abnormal droppings
  36. Damaged air sac

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Proteins: Biochemistry and Biotechnology 2nd Edition

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Proteins: Biochemistry and Biotechnology 2nd Edition
By Gary Walsh

Proteins: Biochemistry And Biotechnology 2Nd Edition

Proteins: Biochemistry and Biotechnology, 2nd Edition PDF is a definitive source of information for all those interested in protein science, and particularly the commercial production and isolation of specific proteins, and their subsequent utilization for applied purposes in industry and medicine.

Fully updated throughout with  new or fundamentally revised sections  on proteomics as, bioinformatics, protein glycosylation and  engineering,  well as sections detailing advances in upstream processing and  newer protein  applications such as enzyme-based biofuel production  this new edition has an increased focus on biochemistry to ensure the balance between biochemisty and biotechnology, enhanced with numerous case studies.

Proteins: Biochemistry and Biotechnology 2nd Edition is an invaluable text for undergraduates of biochemistry and biotechnology but will also be relevant to students of microbiology, molecular biology, bioinformatics and any branch of the biomedical sciences who require a broad overview of the various medical, diagnostic and industrial uses of proteins.

Proteins: Biochemistry and Biotechnology 2nd Edition Features:

  • Provides a comprehensive overview of all aspects of protein biochemisty and protein biotechnology
  • Includes numerous case studies
  • Increased focus on protein biochemistry to ensure balance between biochemisty and biotechnology
  • Includes new section focusing on proteomics as well as sections detailing protein function and enzyme-based biofuel production
Table of Contents

Proteins: Biochemistry and Biotechnology 2nd Edition Table of Contents

Preface xi

About the Companion Website xiii

Chapter 1 Proteins and proteomics 1

1.1 Proteins, an introduction 1

1.2 Genes, genomics and proteomics 2

1.3 Bioinformatics 12

1.4 Proteomics: goals and applications 14

Further reading 22

Chapter 2 Protein structure and engineering 25

2.1 Primary structure 25

2.2 Higher-level structure 36

2.3 Protein classification on the basis of structure 41

2.4 Protein structural stability 45

2.5 Higher-order structure prediction 47

2.6 Protein folding 48

2.7 Intrinsically disordered proteins 50

2.8 Protein engineering 51

2.9 Protein post-translational modification 54

Further reading 62

Chapter 3 Protein sources 65

3.1 Recombinant versus non-recombinant production 65

3.2 Approaches to recombinant protein production 67

3.3 Heterologous protein production in E. coli 72

3.4 Heterologous production in bacteria other than E. coli 77

3.5 Heterologous protein production in yeast 77

3.6 Heterologous protein production in fungi 78

3.7 Proteins from plants 80

3.8 Animal tissue as a protein source 84

3.9 Heterologous protein production in transgenic animals 85

3.10 Heterologous protein production using animal cell culture 86

3.11 Insect cell culture systems 87

Chapter 4 Protein purification and characterization 91

4.1 Protein detection and quantification 93

4.2 Initial recovery of protein 95

4.3 Removal of whole cells and cell debris 98

4.4 Concentration 103

4.5 Chromatographic purification 107

4.6 Protein inactivation and stabilization 128

4.7 Protein characterization 137

Further reading 139

Chapter 5 Large-scale protein production 141

5.1 Upstream processing 141

5.2 Downstream processing 154

5.3 Therapeutic protein production: some special issues 163

5.4 Range and medical significance of impurities potentially present in protein-based therapeutic products 166

Further reading 175

Chapter 6 Therapeutic proteins: blood products, vaccines and enzymes 177

6.1 Blood products 177

6.2 Anticoagulants 184

6.3 Thrombolytic agents 186

6.4 Additional blood-related products 189

6.5 Vaccine technology 190

6.6 Therapeutic enzymes 194

Further reading 202

Chapter 7 Therapeutic antibodies 205

7.1 Antibodies 205

7.2 IgG structure and activity 205

7.3 Antibody therapeutics: polyclonal antibody preparations 209

7.4 Antibody therapeutics: monoclonal antibodies 211

7.5 Therapeutic applications of monoclonal antibodies 220

7.6 Antibody conjugates 223

7.7 Bispecific antibodies 224

7.8 Antibody fragments 225

7.9 Engineering the antibody glycocomponent 228

7.10 Fc fusion proteins 229

Further reading 230

Chapter 8 Hormones and growth factors used therapeutically 233

8.1 Insulin 233

8.2 Glucagon 240

8.3 Gonadotrophins 240

8.4 Growth hormone 243

8.5 Erythropoietin 246

8.6 Other hormones 247

8.7 Growth factors 249

Further reading 253

Chapter 9 Interferons, interleukins and tumour necrosis factors 257

9.1 Regulatory factors: cytokines versus hormones 257

9.2 Interferons 258

9.3 Interleukins 264

9.4 Tumour necrosis factors 271

Further reading 274

Chapter 10 Proteins used for analytical purposes 277

10.1 The IVD sector 279

10.2 The basis of analyte detection and quantification 280

10.3 Enzymes as diagnostic/analytical reagents 281

10.4 Biosensors 289

10.5 Antibodies as analytical reagents 295

Further reading 309

Chapter 11 Industrial enzymes: an introduction 311

11.1 Sales value and manufacturers 313

11.2 Sources and engineering 314

11.3 Environmental benefits 315

11.4 Enzyme detection and quantification 315

11.5 Immobilized enzymes 316

11.6 Extremophiles 319

11.7 Enzymes in organic solvents 324

11.8 Industrial enzymes: the future 325

Further reading 325

Chapter 12 Industrial enzymes: proteases and carbohydrases 327

12.1 Proteolytic enzymes 327

12.2 Carbohydrases 340

Further reading 367

Chapter 13 Additional industrial enzymes 371

13.1 Lipases 371

13.2 Penicillin acylase 375

13.3 Amino acylase and amino acid production 378

13.4 Cyclodextrins and cyclodextrin glycosyltransferase 380

13.5 Enzymes and animal nutrition 382

13.6 Enzymes in molecular biology 387

Further reading 390

Chapter 14 Non-catalytic industrial proteins 393

14.1 Functional properties of proteins 393

14.2 Milk and milk proteins 397

14.3 Animal-derived proteins 408

14.4 Plant-derived proteins 411

14.5 Sweet and taste-modifying proteins 412

Further reading 414

Index 417

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Proteins Structure and Function – David Whitford

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Proteins Structure and Function - David Whitford

Proteins Structure And Function - David Whitford

By David Whitford

Proteins Structure and Function PDF is a comprehensive introduction to the study of proteins and their importance to modern biochemistry. Each chapter addresses the structure and function of proteins with a definitive theme designed to enhance student understanding. Opening with a brief historical overview of the subject the book moves on to discuss the ‘building blocks’ of proteins and their respective chemical and physical properties. Later chapters explore experimental and computational methods of comparing proteins, methods of protein purification and protein folding and stability.

The latest developments in the field are included and key concepts introduced in a user-friendly way to ensure that students are able to grasp the essentials before moving on to more advanced study and analysis of proteins.

An invaluable resource for students of Biochemistry, Molecular Biology, Medicine and Chemistry providing a modern approach to the subject of Proteins.

Table of Contents

Proteins Structure and Function Contents

Preface.

1. An introduction to protein structure and function.

2. Amino acids: the building blocks of proteins.

3. The three-dimensional structure of proteins.

4. The structure and function of fibrous proteins.

5. The structure and function of membrane proteins.

6. The diversity of proteins.

7. Enzyme kinetics, structure, function and catalysis.

8. Protein synthesis, processing and turnover.

9. Protein expression, purification and characterization.

10. Physical methods of determining the three-dimensional structure of proteins.

11. Protein folding in vivo and in vitro.

12. Protein structure and a molecular approach to medicine.

Epilogue.

Glossary.

Appendices.

Bibliography.

References.

Index.

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Redox Biochemistry

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Redox Biochemistry PDF

Redox Biochemistry Pdf

By Ruma Banerjee , Donald Becker , Martin Dickman , Vadim Gladyshev , Stephen Ragsdale

Redox Biochemistry PDF Book is the premier, single-source reference on redox biochemistry, a rapidly emerging field. This reference presents the basic principles and includes detailed chapters focusing on various aspects of five primary areas of redox biochemistry: antioxidant molecules and redox cofactors; antioxidant enzymes; redox regulation of physiological processes; pathological processes related to redox; and specialized methods. This is a go-to resource for professionals in pharmaceuticals, medicine, immunology, nutrition, and environmental fields and an excellent text for upper-level students.
  • richly illustrated, with full color throughout
  • Provides numerous formulas, figures, and tables, and references to related resources
  • Chapters focus on various aspects of five primary areas of redox biochemistry (Antioxidant molecules and redox cofactors; Antioxidant enzymes; Redox regulation of physiological processes; Pathological processes related to redo; and Specialized methods)
  • Spans a wide range of topics, including redox enzymology, mycobacterial drug targets, immunology, neurophysiology and oxygen sensing, electrophysiology of macrophage activation, circadian rhythms, and many more
  • Includes an FTP site for instructors (website has power point slides of all images used in text)
Table of Contents

Redox Biochemistry PDF Book Contents

Contributors.

List of Abbreviations.

Preface.

1. Redox Metabolism and Life (Ruma Banerjee)

2. Antioxidant Molecules and Redox Cofactors (Donald Becker)

3. Antioxidant Enzymes (Vadim Gladyshev)

4. Redox Regulation of Physiological Processes (Martin Dickman)

5. Pathological Processes Related to Redox (Ruma Banerjee)

6. Specialized Methods (Stephen Ragsdale)

7. Index.

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RNA Folding: Methods and Protocols

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RNA Folding: Methods and Protocols PDF 

RNA Folding: Methods and Protocols

Rna Folding: Methods And Protocols Pdf 

By Christina Waldsich

RNA Folding: Methods and Protocols PDF provides a comprehensive collection of experimental protocols which are suitable to dissect RNA folding pathways and to characterize the structure of RNA folding intermediates at nucleotide or even atomic resolution. The presented techniques include powerful tools with a long tradition in RNA research as well as more advanced, novel methods, thus the methods span multiple disciplines, including molecular biology, biochemistry, biophysics, and computational biology.  Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.

Practical and authoritative, RNA Folding: Methods and Protocols serves as a vital reference for researchers attempting to gain insights into the secrets of this astounding macromolecule.

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